WigglyRivers package

Subpackages

• WigglyRivers.nhd_extract package
  • Submodules
  • WigglyRivers.nhd_extract.nhd_extract module
    • ExtractNHDPlusHRData
      • ExtractNHDPlusHRData.get_data_from_nhd_gbd()
      • ExtractNHDPlusHRData.load_nhd_data()
      • ExtractNHDPlusHRData.logger
      • ExtractNHDPlusHRData.nhd_tables
      • ExtractNHDPlusHRData.path_output
      • ExtractNHDPlusHRData.save_format
  • Module contents
• WigglyRivers.rivers package
  • Submodules
  • WigglyRivers.rivers.CompareMeanders module
    • classify_meanders()
    • extract_closet_meanders()
  • WigglyRivers.rivers.ReachExtraction module
    • CompleteReachExtraction
      • CompleteReachExtraction.load_coords()
      • CompleteReachExtraction.logger
      • CompleteReachExtraction.map_complete_network()
      • CompleteReachExtraction.map_complete_network_down_up()
      • CompleteReachExtraction.map_complete_reach()
      • CompleteReachExtraction.map_coordinates()
      • CompleteReachExtraction.save_format
  • WigglyRivers.rivers.RiverFunctions module
    • calculate_amplitude()
    • calculate_asymetry()
    • calculate_channel_width()
    • calculate_coordinates_from_curvature()
    • calculate_curvature()
    • calculate_direction_angle()
    • calculate_direction_azimuth()
    • calculate_funneling_factor()
    • calculate_l()
    • calculate_lambda()
    • calculate_radius_of_curvature()
    • calculate_sinuosity()
    • calculate_spectrum_cuts()
    • convert_str_float_list_vector()
    • extend_node_bound()
    • fit_splines()
    • fit_splines_complete()
    • get_inflection_points()
    • get_reach_distances()
    • kinoshita_curve_abad()
    • kinoshita_curve_zolezzi()
    • line_intersection()
    • rle()
    • rotate()
    • smooth_data()
    • translate()
    • translate_rotate()
  • WigglyRivers.rivers.RiversNetwork module
    • Meander
      • Meander.add_curvature_side()
      • Meander.add_flatness()
      • Meander.add_s_inf()
      • Meander.add_skewness()
      • Meander.calculate_amplitude()
      • Meander.calculate_asymetry()
      • Meander.calculate_funneling_factor()
      • Meander.calculate_j_x()
      • Meander.calculate_l()
      • Meander.calculate_lambda()
      • Meander.calculate_radius()
      • Meander.calculate_sinuosity()
      • Meander.calculate_so()
      • Meander.calculate_wavelength()
      • Meander.get_infection_points()
      • Meander.get_metrics()
      • Meander.perform_calculations()
      • Meander.plot_meander()
    • RiverDatasets
      • RiverDatasets.add_files()
      • RiverDatasets.add_river()
      • RiverDatasets.extract_cwt_data()
      • RiverDatasets.get_metric_databases()
      • RiverDatasets.get_reach()
      • RiverDatasets.get_reaches_from_network()
      • RiverDatasets.load_extracted_in_comid_network()
      • RiverDatasets.load_huc_list_in_comid_network()
      • RiverDatasets.load_linking_network()
      • RiverDatasets.load_river_network()
      • RiverDatasets.load_river_network_ids()
      • RiverDatasets.logger
      • RiverDatasets.map_network()
      • RiverDatasets.plot_rivers()
      • RiverDatasets.save_cwt_data()
      • RiverDatasets.save_databases_meanders()
      • RiverDatasets.save_rivers()
      • RiverDatasets.save_tree_scales()
    • RiverTransect
      • RiverTransect.add_meander()
      • RiverTransect.add_meanders_from_tree_scales()
      • RiverTransect.calculate_curvature()
      • RiverTransect.calculate_reach_metrics()
      • RiverTransect.calculate_smooth()
      • RiverTransect.calculate_spline()
      • RiverTransect.create_meander_geopandas_dataframe()
      • RiverTransect.detect_meanders_from_cwt()
      • RiverTransect.eval_splines()
      • RiverTransect.extract_cwt_tree()
      • RiverTransect.extract_data_to_save()
      • RiverTransect.extract_tree()
      • RiverTransect.find_peaks_in_poly()
      • RiverTransect.get_cwt_angle()
      • RiverTransect.get_cwt_curvature()
      • RiverTransect.get_tree_center_points_in_planimetry()
      • RiverTransect.interactive_meander_characterization_plot()
      • RiverTransect.logger
      • RiverTransect.plot_meander()
      • RiverTransect.plot_tree_nodes()
      • RiverTransect.prune_tree_by_gamma_width()
      • RiverTransect.prune_tree_by_peak_power()
      • RiverTransect.prune_tree_by_sinuosity()
      • RiverTransect.remove_meander()
      • RiverTransect.report_meanders_metrics()
      • RiverTransect.save_meanders_database()
      • RiverTransect.save_river_coordinates()
      • RiverTransect.scale_coordinates()
      • RiverTransect.select_database()
      • RiverTransect.set_data_source()
      • RiverTransect.set_gamma_width()
      • RiverTransect.set_planimetry_derivatives()
      • RiverTransect.set_splines()
      • RiverTransect.translate_xy_start()
      • RiverTransect.update_tree_scales()
      • RiverTransect.update_tree_scales_meander_database()
  • Module contents
• WigglyRivers.tests package
  • Submodules
  • WigglyRivers.tests.test_RiverNetwork module
    • create_data()
    • test_curvature_derivatives()
    • test_curvature_grad()
    • test_cwt_calculation()
    • test_load_river_dataset()
    • test_meander_identification()
  • Module contents
• WigglyRivers.utilities package
  • Submodules
  • WigglyRivers.utilities.Logger module
    • Logger
      • Logger.close_logger()
      • Logger.critical()
      • Logger.debug()
      • Logger.error()
      • Logger.info()
      • Logger.logger
      • Logger.set_logger()
      • Logger.warning()
  • WigglyRivers.utilities.classExceptions module
    • FileNotFoundError
    • FormatError
    • HUCNotFoundError
    • SmallMeanderError
    • VariableNotFoundError
    • deprecated()
  • WigglyRivers.utilities.filesManagement module
    • NpEncoder
      • NpEncoder.default()
    • create_geopandas_dataframe()
    • get_load_formats()
    • get_save_formats()
    • load_data()
    • load_dict_from_hdf5()
    • read_gdb()
    • recursively_load_dict_contents_from_group()
    • recursively_save_dict_contents_to_group()
    • save_data()
    • save_dict_to_hdf5()
  • WigglyRivers.utilities.general_functions module
    • circumcenter()
    • convolution_smoother()
    • gaussian_function()
    • savgol_filter()
  • WigglyRivers.utilities.graphs module
    • MidPointLogNorm
    • MidPointNorm
    • plot_meander_matplotlib()
    • plot_node()
    • plot_river_spectrum_compiled()
    • plot_river_with_plotly()
    • plot_rivers_matplotlib()
    • plot_rivers_plotly()
    • plot_tree_from_anytree()
    • plot_wavelet_system()
  • WigglyRivers.utilities.interactivePlotly module
    • check_meander_id()
    • create_hover_template_meander()
    • load_meanders()
    • plot_interactive_river_plain()
  • WigglyRivers.utilities.utilities module
    • cr_folder()
    • fix_widget_error()
    • get_folders()
    • toc()
    • unzip_file()
  • Module contents
• WigglyRivers.wavelet_tree package
  • Submodules
  • WigglyRivers.wavelet_tree.TreeScale module
    • RiverTreeScales
      • RiverTreeScales.add_parameter_to_nodes()
      • RiverTreeScales.build_trees_from_tree_scales_dict()
      • RiverTreeScales.compile_database()
      • RiverTreeScales.create_connectivity_matrix()
      • RiverTreeScales.filter_nodes()
      • RiverTreeScales.load_tree()
      • RiverTreeScales.load_trees_dict()
      • RiverTreeScales.prune()
      • RiverTreeScales.save_tree()
      • RiverTreeScales.save_tree_figure()
      • RiverTreeScales.select_node()
      • RiverTreeScales.update_database()
  • WigglyRivers.wavelet_tree.WaveletTreeFunctions module
    • calculate_cwt()
    • calculate_meander_shape()
    • check_conn()
    • clean_tree()
    • detect_meanders()
    • find_peak_in_poly()
    • find_wave_significance()
    • find_zc_lines()
    • get_branch()
    • get_centers()
    • get_tree_scales_dict()
    • get_zcline()
    • hexl()
    • inpolygon()
    • meander_bounds()
    • n_child()
    • plot_regions()
    • plot_tree()
    • recursive_tree_structure()
    • remove_nodes()
    • remove_peak_from_nodes()
    • sadext()
    • scale_space_tree()
  • WigglyRivers.wavelet_tree.waveletFunctions module
    • calculate_global_wavelet_spectrum()
    • calculate_scale_averaged_wavelet_power()
    • chisquare_inv()
    • chisquare_solve()
    • iwavelet()
    • wave_bases()
    • wave_signif()
    • wavelet()
  • Module contents

Submodules

WigglyRivers.AppFiles module

Application files module

WigglyRivers.VersionControl module

Version control module

Module contents