Index

A

add_curvature_side() (WigglyRivers.rivers.RiversNetwork.Meander method) add_files() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) add_flatness() (WigglyRivers.rivers.RiversNetwork.Meander method) add_meander() (WigglyRivers.rivers.RiversNetwork.RiverTransect method)

add_meanders_from_tree_scales() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) add_parameter_to_nodes() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) add_river() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) add_s_inf() (WigglyRivers.rivers.RiversNetwork.Meander method) add_skewness() (WigglyRivers.rivers.RiversNetwork.Meander method)

B

build_trees_from_tree_scales_dict() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method)

C

calculate_amplitude() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_asymetry() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_channel_width() (in module WigglyRivers.rivers.RiverFunctions) calculate_coordinates_from_curvature() (in module WigglyRivers.rivers.RiverFunctions) calculate_curvature() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.RiverTransect method) calculate_cwt() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) calculate_direction_angle() (in module WigglyRivers.rivers.RiverFunctions) calculate_direction_azimuth() (in module WigglyRivers.rivers.RiverFunctions) calculate_funneling_factor() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_global_wavelet_spectrum() (in module WigglyRivers.wavelet_tree.waveletFunctions) calculate_j_x() (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_l() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_lambda() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_meander_shape() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) calculate_radius() (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_radius_of_curvature() (in module WigglyRivers.rivers.RiverFunctions) calculate_reach_metrics() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) calculate_scale_averaged_wavelet_power() (in module WigglyRivers.wavelet_tree.waveletFunctions) calculate_sinuosity() (in module WigglyRivers.rivers.RiverFunctions) (WigglyRivers.rivers.RiversNetwork.Meander method)

calculate_smooth() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) calculate_so() (WigglyRivers.rivers.RiversNetwork.Meander method) calculate_spectrum_cuts() (in module WigglyRivers.rivers.RiverFunctions) calculate_spline() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) calculate_wavelength() (WigglyRivers.rivers.RiversNetwork.Meander method) check_conn() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) check_meander_id() (in module WigglyRivers.utilities.interactivePlotly) chisquare_inv() (in module WigglyRivers.wavelet_tree.waveletFunctions) chisquare_solve() (in module WigglyRivers.wavelet_tree.waveletFunctions) circumcenter() (in module WigglyRivers.utilities.general_functions) classify_meanders() (in module WigglyRivers.rivers.CompareMeanders) clean_tree() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) close_logger() (WigglyRivers.utilities.Logger.Logger method) compile_database() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) CompleteReachExtraction (class in WigglyRivers.rivers.ReachExtraction) convert_str_float_list_vector() (in module WigglyRivers.rivers.RiverFunctions) convolution_smoother() (in module WigglyRivers.utilities.general_functions) cr_folder() (in module WigglyRivers.utilities.utilities) create_connectivity_matrix() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) create_data() (in module WigglyRivers.tests.test_RiverNetwork) create_geopandas_dataframe() (in module WigglyRivers.utilities.filesManagement) create_hover_template_meander() (in module WigglyRivers.utilities.interactivePlotly) create_meander_geopandas_dataframe() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) critical() (WigglyRivers.utilities.Logger.Logger method)

D

debug() (WigglyRivers.utilities.Logger.Logger method) default() (WigglyRivers.utilities.filesManagement.NpEncoder method)

deprecated() (in module WigglyRivers.utilities.classExceptions) detect_meanders() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) detect_meanders_from_cwt() (WigglyRivers.rivers.RiversNetwork.RiverTransect method)

E

error() (WigglyRivers.utilities.Logger.Logger method) eval_splines() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) extend_node_bound() (in module WigglyRivers.rivers.RiverFunctions) extract_closet_meanders() (in module WigglyRivers.rivers.CompareMeanders)

extract_cwt_data() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) extract_cwt_tree() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) extract_data_to_save() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) extract_tree() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) ExtractNHDPlusHRData (class in WigglyRivers.nhd_extract.nhd_extract)

F

FileNotFoundError filter_nodes() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) find_peak_in_poly() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) find_peaks_in_poly() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) find_wave_significance() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions)

find_zc_lines() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) fit_splines() (in module WigglyRivers.rivers.RiverFunctions) fit_splines_complete() (in module WigglyRivers.rivers.RiverFunctions) fix_widget_error() (in module WigglyRivers.utilities.utilities) FormatError

G

gaussian_function() (in module WigglyRivers.utilities.general_functions) get_branch() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) get_centers() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) get_cwt_angle() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) get_cwt_curvature() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) get_data_from_nhd_gbd() (WigglyRivers.nhd_extract.nhd_extract.ExtractNHDPlusHRData method) get_folders() (in module WigglyRivers.utilities.utilities) get_infection_points() (WigglyRivers.rivers.RiversNetwork.Meander method) get_inflection_points() (in module WigglyRivers.rivers.RiverFunctions)

get_load_formats() (in module WigglyRivers.utilities.filesManagement) get_metric_databases() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) get_metrics() (WigglyRivers.rivers.RiversNetwork.Meander method) get_reach() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) get_reach_distances() (in module WigglyRivers.rivers.RiverFunctions) get_reaches_from_network() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) get_save_formats() (in module WigglyRivers.utilities.filesManagement) get_tree_center_points_in_planimetry() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) get_tree_scales_dict() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) get_zcline() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions)

H

hexl() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions)

HUCNotFoundError

I

info() (WigglyRivers.utilities.Logger.Logger method) inpolygon() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions)

interactive_meander_characterization_plot() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) iwavelet() (in module WigglyRivers.wavelet_tree.waveletFunctions)

K

kinoshita_curve_abad() (in module WigglyRivers.rivers.RiverFunctions)

kinoshita_curve_zolezzi() (in module WigglyRivers.rivers.RiverFunctions)

L

line_intersection() (in module WigglyRivers.rivers.RiverFunctions) load_coords() (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction method) load_data() (in module WigglyRivers.utilities.filesManagement) load_dict_from_hdf5() (in module WigglyRivers.utilities.filesManagement) load_extracted_in_comid_network() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) load_huc_list_in_comid_network() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) load_linking_network() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) load_meanders() (in module WigglyRivers.utilities.interactivePlotly) load_nhd_data() (WigglyRivers.nhd_extract.nhd_extract.ExtractNHDPlusHRData method)

load_river_network() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) load_river_network_ids() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) load_tree() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) load_trees_dict() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) Logger (class in WigglyRivers.utilities.Logger) logger (WigglyRivers.nhd_extract.nhd_extract.ExtractNHDPlusHRData property) (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction property) (WigglyRivers.rivers.RiversNetwork.RiverDatasets property) (WigglyRivers.rivers.RiversNetwork.RiverTransect property) (WigglyRivers.utilities.Logger.Logger property)

M

map_complete_network() (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction method) map_complete_network_down_up() (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction method) map_complete_reach() (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction method) map_coordinates() (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction method) map_network() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) Meander (class in WigglyRivers.rivers.RiversNetwork) meander_bounds() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) MidPointLogNorm (class in WigglyRivers.utilities.graphs) MidPointNorm (class in WigglyRivers.utilities.graphs) module WigglyRivers WigglyRivers.AppFiles WigglyRivers.nhd_extract WigglyRivers.nhd_extract.nhd_extract WigglyRivers.rivers WigglyRivers.rivers.CompareMeanders WigglyRivers.rivers.ReachExtraction WigglyRivers.rivers.RiverFunctions WigglyRivers.rivers.RiversNetwork WigglyRivers.tests WigglyRivers.tests.test_RiverNetwork WigglyRivers.utilities WigglyRivers.utilities.classExceptions WigglyRivers.utilities.filesManagement WigglyRivers.utilities.general_functions WigglyRivers.utilities.graphs WigglyRivers.utilities.interactivePlotly WigglyRivers.utilities.Logger WigglyRivers.utilities.utilities WigglyRivers.VersionControl WigglyRivers.wavelet_tree WigglyRivers.wavelet_tree.TreeScale WigglyRivers.wavelet_tree.waveletFunctions WigglyRivers.wavelet_tree.WaveletTreeFunctions

N

n_child() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions)

nhd_tables (WigglyRivers.nhd_extract.nhd_extract.ExtractNHDPlusHRData property) NpEncoder (class in WigglyRivers.utilities.filesManagement)

P

path_output (WigglyRivers.nhd_extract.nhd_extract.ExtractNHDPlusHRData property) perform_calculations() (WigglyRivers.rivers.RiversNetwork.Meander method) plot_interactive_river_plain() (in module WigglyRivers.utilities.interactivePlotly) plot_meander() (WigglyRivers.rivers.RiversNetwork.Meander method) (WigglyRivers.rivers.RiversNetwork.RiverTransect method) plot_meander_matplotlib() (in module WigglyRivers.utilities.graphs) plot_node() (in module WigglyRivers.utilities.graphs) plot_regions() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) plot_river_spectrum_compiled() (in module WigglyRivers.utilities.graphs) plot_river_with_plotly() (in module WigglyRivers.utilities.graphs)

plot_rivers() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) plot_rivers_matplotlib() (in module WigglyRivers.utilities.graphs) plot_rivers_plotly() (in module WigglyRivers.utilities.graphs) plot_tree() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) plot_tree_from_anytree() (in module WigglyRivers.utilities.graphs) plot_tree_nodes() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) plot_wavelet_system() (in module WigglyRivers.utilities.graphs) prune() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) prune_tree_by_gamma_width() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) prune_tree_by_peak_power() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) prune_tree_by_sinuosity() (WigglyRivers.rivers.RiversNetwork.RiverTransect method)

R

read_gdb() (in module WigglyRivers.utilities.filesManagement) recursive_tree_structure() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) recursively_load_dict_contents_from_group() (in module WigglyRivers.utilities.filesManagement) recursively_save_dict_contents_to_group() (in module WigglyRivers.utilities.filesManagement) remove_meander() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) remove_nodes() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions)

remove_peak_from_nodes() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) report_meanders_metrics() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) RiverDatasets (class in WigglyRivers.rivers.RiversNetwork) RiverTransect (class in WigglyRivers.rivers.RiversNetwork) RiverTreeScales (class in WigglyRivers.wavelet_tree.TreeScale) rle() (in module WigglyRivers.rivers.RiverFunctions) rotate() (in module WigglyRivers.rivers.RiverFunctions)

S

sadext() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) save_cwt_data() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) save_data() (in module WigglyRivers.utilities.filesManagement) save_databases_meanders() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) save_dict_to_hdf5() (in module WigglyRivers.utilities.filesManagement) save_format (WigglyRivers.nhd_extract.nhd_extract.ExtractNHDPlusHRData property) (WigglyRivers.rivers.ReachExtraction.CompleteReachExtraction property) save_meanders_database() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) save_river_coordinates() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) save_rivers() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) save_tree() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) save_tree_figure() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method)

save_tree_scales() (WigglyRivers.rivers.RiversNetwork.RiverDatasets method) savgol_filter() (in module WigglyRivers.utilities.general_functions) scale_coordinates() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) scale_space_tree() (in module WigglyRivers.wavelet_tree.WaveletTreeFunctions) select_database() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) select_node() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method) set_data_source() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) set_gamma_width() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) set_logger() (WigglyRivers.utilities.Logger.Logger method) set_planimetry_derivatives() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) set_splines() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) SmallMeanderError smooth_data() (in module WigglyRivers.rivers.RiverFunctions)

T

test_curvature_derivatives() (in module WigglyRivers.tests.test_RiverNetwork) test_curvature_grad() (in module WigglyRivers.tests.test_RiverNetwork) test_cwt_calculation() (in module WigglyRivers.tests.test_RiverNetwork) test_load_river_dataset() (in module WigglyRivers.tests.test_RiverNetwork)

test_meander_identification() (in module WigglyRivers.tests.test_RiverNetwork) toc() (in module WigglyRivers.utilities.utilities) translate() (in module WigglyRivers.rivers.RiverFunctions) translate_rotate() (in module WigglyRivers.rivers.RiverFunctions) translate_xy_start() (WigglyRivers.rivers.RiversNetwork.RiverTransect method)

U

unzip_file() (in module WigglyRivers.utilities.utilities) update_database() (WigglyRivers.wavelet_tree.TreeScale.RiverTreeScales method)

update_tree_scales() (WigglyRivers.rivers.RiversNetwork.RiverTransect method) update_tree_scales_meander_database() (WigglyRivers.rivers.RiversNetwork.RiverTransect method)

V

VariableNotFoundError

W

warning() (WigglyRivers.utilities.Logger.Logger method) wave_bases() (in module WigglyRivers.wavelet_tree.waveletFunctions) wave_signif() (in module WigglyRivers.wavelet_tree.waveletFunctions) wavelet() (in module WigglyRivers.wavelet_tree.waveletFunctions) WigglyRivers module WigglyRivers.AppFiles module WigglyRivers.nhd_extract module WigglyRivers.nhd_extract.nhd_extract module WigglyRivers.rivers module WigglyRivers.rivers.CompareMeanders module WigglyRivers.rivers.ReachExtraction module WigglyRivers.rivers.RiverFunctions module WigglyRivers.rivers.RiversNetwork module WigglyRivers.tests module WigglyRivers.tests.test_RiverNetwork module

WigglyRivers.utilities module WigglyRivers.utilities.classExceptions module WigglyRivers.utilities.filesManagement module WigglyRivers.utilities.general_functions module WigglyRivers.utilities.graphs module WigglyRivers.utilities.interactivePlotly module WigglyRivers.utilities.Logger module WigglyRivers.utilities.utilities module WigglyRivers.VersionControl module WigglyRivers.wavelet_tree module WigglyRivers.wavelet_tree.TreeScale module WigglyRivers.wavelet_tree.waveletFunctions module WigglyRivers.wavelet_tree.WaveletTreeFunctions module